Basic Information
Locus ID:
Chr22G003240
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000022 | 2678223 | 2681468 | + | Chr22G003240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 303 | 361 | 7.7E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 711 | 998 | 2.1E-40 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 76 | 2.8E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 156 | 214 | 2.2E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 229 | 288 | 1.7E-6 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 301 | 608 | 5.89E-54 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 66 | 370 | 4.08E-59 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 703 | 999 | 7.69E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 691 | 791 | 1.4E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 217 | 5.2E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 218 | 293 | 4.4E-19 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 792 | 1023 | 1.4E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 294 | 627 | 5.6E-83 | IPR032675 |
| SMART | SM00220 | serkin_6 | 707 | 999 | 3.1E-26 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 562 | 586 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 251 | 275 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 348 | 372 | 90.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 104 | 128 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 178 | 202 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 514 | 538 | 52.0 | IPR003591 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 24 | 5.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 707 | 999 | 35.325825 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 850 | 862 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 713 | 741 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_025805251.1 | receptor-like protein kinase HSL1 [Panicum hallii] | 0 |
| O49545 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3HAM9 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_3G208600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology