Basic Information
Locus ID:
Chr22G000560
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000022 | 476154 | 478939 | + | Chr22G000560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 74 | 336 | 9.88706E-110 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 73 | 336 | 8.1E-61 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 56 | 336 | 7.52E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 163 | 349 | 1.7E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 54 | 145 | 6.4E-14 | - |
| SMART | SM00220 | serkin_6 | 65 | 339 | 1.9E-53 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 17 | 345 | 5.3E-57 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 62 | 339 | 38.435307 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 203 | 215 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 307 | 329 | 4.5E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 197 | 215 | 4.5E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 159 | 172 | 4.5E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 263 | 285 | 4.5E-16 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01490.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_002441568.1 | serine/threonine-protein kinase STY8 [Sorghum bicolor] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | C5YW43 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3009G242800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology