Basic Information
Locus ID:
Chr22G000300
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Voltage-dependent anion channel
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000022 | 224016 | 226190 | - | Chr22G000300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09323 | TDT_SLAC1_like | 199 | 491 | 2.43053E-113 | - |
| Pfam | PF03595 | Voltage-dependent anion channel | 200 | 501 | 8.5E-49 | IPR004695 |
| Gene3D | G3DSA:1.50.10.150 | - | 196 | 512 | 1.1E-71 | IPR038665 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 161 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 101 | - | - |
Gene Ontology
Biological Process:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27970.1 | SLAC1 homologue 2. Encodes a protein with ten predicted transmembrane helices. The SLAH2 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. But, it is not expressed in guard cells and cannot complement a slac1-2 mutant suggesting that it performs a different function. SLAH2:GFP localizes to the plasma membrane. | 0 |
| RefSeq | XP_039799676.1 | S-type anion channel SLAH2-like [Panicum virgatum] | 0 |
| Q9ASQ7 | S-type anion channel SLAH2 OS=Arabidopsis thaliana OX=3702 GN=SLAH2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A835F2Z6 | S-type anion channel SLAH2 OS=Digitaria exilis OX=1010633 GN=HU200_019311 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology