Basic Information
Locus ID:
Chr21G015060
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Ubiquitin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000021 | 42072764 | 42073303 | + | Chr21G015060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05230.1 | Ubiquitin-like superfamily protein. | 0 |
| RefSeq | XP_034583105.1 | uncharacterized protein LOC117846106 [Setaria viridis] | 0 |
| TrEMBL | A0A2T7ETQ7 | Ubiquitin-like domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G296900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10029513m.g.v1.0 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.2349, BH03.2480, CH03.2673 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0539190, gene-QOZ80_6BG0492510 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0489850.1.CDS1 |
| Poaceae | Oryza coarctata | 1 | Oco17G007580 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g30390.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G220400 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0701629 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr0G015850, Chr14G016030, Chr21G015060 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G412500 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5AG040400 |
| Poaceae | Triticum aestivum | 2 | TraesCS5A02G258000.1.cds1, TraesCS5B02G257200.1.cds1 |
| Poaceae | Zea mays | 1 | Zm00001eb101690_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-10485 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g30519 |