Basic Information
Locus ID:
Chr21G008450
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000021 | 28040641 | 28044786 | - | Chr21G008450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 638 | 678 | 4.39528E-21 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 636 | 683 | 9.9E-12 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 638 | 684 | 3.81E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 619 | 690 | 2.2E-14 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 639 | 678 | 10.910707 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 488 | 533 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 325 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 413 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 340 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 215 | - | - |
| Coils | Coil | Coil | 568 | 588 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_025800978.1 | uncharacterized protein LOC112880532 [Panicum hallii] | 0 |
| TrEMBL | A0A5J9THB1 | RING-type domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_44171 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology