Basic Information
Locus ID:
Chr21G008240
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000021 | 26938288 | 26939555 | + | Chr21G008240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 69 | 6.3E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 124 | 169 | 4.2E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 95 | 379 | 2.72E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 207 | 383 | 2.1E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 206 | 3.0E-28 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17640.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_004965417.1 | probable LRR receptor-like serine/threonine-protein kinase At4g20940 [Setaria italica] | 0 |
| TrEMBL | K3XX40 | LRRNT_2 domain-containing protein OS=Setaria italica OX=4555 GN=101783631 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology