Basic Information
Locus ID:
Chr21G006730
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000021 | 13350010 | 13354629 | + | Chr21G006730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 917 | 1191 | 1.1E-43 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 255 | 268 | 1.8 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 177 | 194 | 0.13 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 404 | 466 | 7.1E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 696 | 751 | 3.5E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 75 | 1.5E-10 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 376 | 392 | 1.3 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 896 | 1193 | 6.7E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 680 | 805 | 7.37E-26 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 67 | 392 | 1.16E-54 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 296 | 617 | 2.43E-62 | - |
| Gene3D | G3DSA:3.30.1490.310 | - | 631 | 688 | 1.2E-277 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 176 | 808 | 1.2E-277 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 173 | 3.1E-28 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 991 | 1208 | 8.8E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 880 | 990 | 2.2E-36 | - |
| SMART | SM00369 | LRR_typ_2 | 105 | 145 | 290.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 915 | 1193 | 6.9E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 714 | 737 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 177 | 201 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 328 | 352 | 95.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 501 | 525 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 738 | 762 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 574 | 598 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 402 | 431 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 453 | 477 | 120.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 915 | 1206 | 38.407036 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 404 | 425 | 7.319219 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 921 | 944 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1039 | 1051 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55610.1 | BRI1 like. mutant has Altered vascular cell differentiation; LRR Receptor Kinase | 0 |
| RefSeq | XP_002459968.1 | brassinosteroid LRR receptor kinase BRL1 [Sorghum bicolor] | 0 |
| Q69JN6 | Brassinosteroid LRR receptor kinase BRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=BRL1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3L6QTI5 | non-specific serine/threonine protein kinase OS=Panicum miliaceum OX=4540 GN=C2845_PM04G16390 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology