Basic Information
Locus ID:
Chr21G006370
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
proline-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000021 | 12023901 | 12025084 | - | Chr21G006370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 243 | 354 | 2.5E-17 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 218 | 360 | 1.39E-35 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 316 | 363 | 1.7E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 213 | 315 | 7.6E-34 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 240 | 366 | 16.174255 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 246 | 268 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 220 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G23540.2 | - | 0 |
| RefSeq | XP_021304691.1 | proline-rich receptor-like protein kinase PERK8 [Sorghum bicolor] | 0 |
| Q9ZUE0 | Proline-rich receptor-like protein kinase PERK12 OS=Arabidopsis thaliana OX=3702 GN=PERK12 PE=2 SV=2 | 0 | |
| TrEMBL | A0A194YK52 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3010G139100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Chr21G006370.