Basic Information
Locus ID:
Chr21G003510
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000021 | 4271357 | 4275128 | + | Chr21G003510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 7 | 95 | 9.69691E-47 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 7 | 116 | 1.8E-43 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 5 | 96 | 4.0E-27 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 101 | 2.6E-42 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 118 | 2.9E-51 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 8 | 76 | 9.351744 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 114 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22050.1 | membrane-anchored ubiquitin-fold protein 6 precursor. | 0 |
| RefSeq | XP_025812813.1 | membrane-anchored ubiquitin-fold protein 3-like [Panicum hallii] | 0 |
| Q6Z8K4 | Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8T0T516 | Membrane-anchored ubiquitin-fold protein OS=Panicum virgatum OX=38727 GN=PVAP13_4NG078100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology