Basic Information
Locus ID:
Chr21G000370
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000021 | 272206 | 275779 | + | Chr21G000370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 413 | 673 | 3.13759E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 411 | 673 | 9.4E-38 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 65 | 8.9E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 141 | 200 | 3.7E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 391 | 672 | 1.54E-53 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 235 | 3.78E-44 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 486 | 675 | 4.1E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 177 | 246 | 6.6E-16 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 386 | 485 | 2.2E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 176 | 2.6E-43 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 139 | 163 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 91 | 115 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 187 | 211 | 12.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 407 | 675 | 28.69698 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_004964453.1 | probable leucine-rich repeat receptor-like protein kinase At5g63930 [Setaria italica] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TN90 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_46437 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology