Basic Information
Locus ID:
Chr20G013640
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000020 | 42032302 | 42035466 | - | Chr20G013640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 492 | 790 | 2.30053E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 487 | 719 | 1.2E-42 | IPR000719 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 83 | 310 | 3.66E-15 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 465 | 790 | 2.29E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 462 | 575 | 1.6E-30 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 74 | 351 | 4.1E-17 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 576 | 808 | 5.5E-52 | - |
| SMART | SM00220 | serkin_6 | 486 | 792 | 1.2E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 486 | 792 | 38.661449 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 627 | 639 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 492 | 514 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 513 | 533 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 807 | 850 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | NP_001344475.1 | Serine/threonine-protein kinase-like protein CCR4 [Zea mays] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6EAE0 | Serine/threonine-protein kinase-like protein CCR4 OS=Zea mays OX=4577 GN=CCR4_0 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology