Basic Information
Locus ID:
Chr20G010640
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000020 | 37708507 | 37711555 | + | Chr20G010640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 702 | 963 | 1.4E-47 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 80 | 3.0E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 426 | 484 | 1.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 280 | 339 | 2.0E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 69 | 392 | 3.17E-61 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 340 | 608 | 7.06E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 701 | 967 | 8.77E-72 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 464 | 620 | 5.7E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 323 | 463 | 7.9E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 194 | 264 | 1.3E-17 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 703 | 771 | 8.7E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 772 | 989 | 8.7E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 193 | 1.8E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 265 | 322 | 7.8E-17 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 350 | 374 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 447 | 472 | 35.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 697 | 989 | 1.3E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 206 | 230 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 302 | 326 | 7.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 134 | 158 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 254 | 278 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 569 | 592 | 44.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 697 | 971 | 38.802788 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 703 | 726 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 817 | 829 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 447 | 460 | 7.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 305 | 318 | 7.1E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 968 | 990 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_039817120.1 | leucine-rich repeat receptor-like protein kinase TDR [Panicum virgatum] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SRM8 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_52877 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology