Basic Information
Locus ID:
Chr20G010000
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000020 | 35563115 | 35563426 | + | Chr20G010000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 4 | 92 | 2.8E-18 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 3 | 91 | 3.49E-19 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 1 | 95 | 7.0E-25 | IPR011333 |
| SMART | SM00225 | BTB_4 | 1 | 103 | 1.3E-6 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 1 | 66 | 14.087487 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.5 | - | 0 |
| RefSeq | XP_003573574.1 | BTB/POZ and MATH domain-containing protein 2 [Brachypodium distachyon] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SFL3 | Speckle-type POZ protein-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_57061 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Chr20G010000.