Basic Information
Locus ID:
Chr20G009960
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
BTB POZ and MATH domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000020 | 35406316 | 35407422 | - | Chr20G009960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 23 | 162 | 1.4159E-19 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 187 | 294 | 3.4E-19 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 20 | 167 | 3.11E-22 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 177 | 295 | 5.3E-24 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 166 | 325 | 2.9E-35 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 21 | 165 | 4.0E-21 | IPR008974 |
| SMART | SM00225 | BTB_4 | 196 | 295 | 8.2E-14 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 196 | 260 | 13.942714 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 22 | 161 | 17.655006 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G21010.1 | BTB-POZ and MATH domain 5. | 0 |
| RefSeq | XP_040256427.1 | BTB/POZ and MATH domain-containing protein 2-like [Aegilops tauschii subsp. strangulata] | 0 |
| Q1EBV6 | BTB/POZ and MATH domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=BPM5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0RAN2 | BTB/POZ domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6KG198800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology