Basic Information
Locus ID:
Chr20G009420
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000020 | 33201881 | 33219827 | + | Chr20G009420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 329 | 554 | 1.2E-34 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 142 | 243 | 1.6E-12 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 288 | 555 | 4.05E-65 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 133 | 247 | 1.9E-19 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 364 | 570 | 2.6E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 271 | 363 | 1.3E-10 | - |
| SMART | SM00220 | serkin_6 | 297 | 557 | 6.8E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 297 | 562 | 27.665197 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 132 | 247 | 16.353069 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 407 | 419 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 593 | 613 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 594 | 613 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11460.2 | - | 0 |
| RefSeq | XP_052151438.1 | cysteine-rich receptor-like protein kinase 10 [Oryza glaberrima] | 0 |
| Q9LDT0 | Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana OX=3702 GN=CRK30 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J9W2L7 | Cysteine-rich receptor-like protein kinase 25 OS=Eragrostis curvula OX=38414 GN=EJB05_08526 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology