Basic Information
Locus ID:
Chr20G007810
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000020 | 15344800 | 15345779 | - | Chr20G007810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 216 | 285 | 3.96E-6 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 198 | 287 | 6.6E-25 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 196 | 213 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 169 | 213 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25840.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_022680566.1 | serine/threonine-protein kinase prpf4B [Setaria italica] | 0 |
| Q54WE5 | Serine/threonine-protein kinase prpf4B OS=Dictyostelium discoideum OX=44689 GN=prp4k PE=3 SV=1 | 0 | |
| TrEMBL | A0A3L6R6I1 | non-specific serine/threonine protein kinase OS=Panicum miliaceum OX=4540 GN=C2845_PM06G35610 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Sporobolus alterniflorus | 2 | Chr06G012400, Chr20G007810 |