HalophFGD

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Basic Information
Locus ID: Chr20G007280
Species & Taxonomic ID: Sporobolus alterniflorus & 29706
Genome Assembly: GWHCBIM00000000
Description: Ribonuclease H protein
Maps and Mapping Data
Chromosome Start End Strand ID
GWHCBIM00000020 12470123 12470926 - Chr20G007280
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
0.00 0.00 Da 0.00 0.00 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 78 107 - -
MobiDBLite mobidb-lite consensus disorder prediction 81 104 - -
Coils Coil Coil 207 208 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039831752.1 uncharacterized protein LOC120692501 isoform X1 [Panicum virgatum] 0
TrEMBL A0A8T0PJU2 Transcription factor OS=Panicum virgatum OX=38727 GN=PVAP13_8KG111609 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Sporobolus alterniflorus 18 Chr01G004110, Chr01G022620, Chr01G029460, Chr02G015880 ...
Chr03G010510, Chr03G011210, Chr05G012140, Chr08G011960, Chr12G017580, Chr15G020620, Chr20G007280, Chr21G012250, Chr23G005430, Chr25G012960, Chr26G008340, Chr26G011960, Chr27G003840, Chr30G007210
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.