Basic Information
Locus ID:
Chr20G007260
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000020 | 12336874 | 12341164 | - | Chr20G007260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 59 | 79 | 3.95E-5 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 35 | 104 | 2.7E-5 | IPR015943 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 62 | 77 | 10.040596 | IPR001680 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 17 | 5.0 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 62 | 76 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004969807.1 | protein SPA1-RELATED 4 isoform X2 [Setaria italica] | 0 |
| TrEMBL | A0A1D6NDH2 | SPA1-related 3 OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d043592 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology