Basic Information
Locus ID:
Chr20G006730
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000020 | 10276070 | 10277245 | + | Chr20G006730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 21 | 50 | 4.6E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 20 | 81 | 1.57E-13 | IPR036047 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 110 | 353 | 7.85E-5 | IPR011047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 19 | 57 | 8.9E-8 | - |
| SMART | SM00256 | fbox_2 | 20 | 61 | 1.4E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 113 | 330 | 3.5E-22 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16210.1 | F-box family protein. | 0 |
| RefSeq | XP_039841203.1 | F-box/LRR-repeat/kelch-repeat protein At1g09650-like [Panicum virgatum] | 0 |
| Q9LU24 | Putative F-box protein At3g16210 OS=Arabidopsis thaliana OX=3702 GN=At3g16210 PE=4 SV=1 | 0 | |
| TrEMBL | A0A3L6T3S6 | Putative F-box protein OS=Panicum miliaceum OX=4540 GN=C2845_PM05G03590 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology