Basic Information
Locus ID:
Chr20G003720
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000020 | 3098841 | 3099863 | + | Chr20G003720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 120 | 191 | 2.5E-7 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 119 | 260 | 2.99E-15 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 99 | 193 | 3.7E-14 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02070.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_004973737.1 | wall-associated receptor kinase 2 [Setaria italica] | 0 |
| Q9LZM4 | Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana OX=3702 GN=WAKL20 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T0RIW7 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6KG313400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH08.2140 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr20G003720, Chr29G003470 |