Basic Information
Locus ID:
Chr19G018830
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000019 | 43920473 | 43929241 | + | Chr19G018830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 400 | 668 | 1.61041E-87 | - |
| Pfam | PF13855 | Leucine rich repeat | 175 | 231 | 8.7E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 75 | 5.8E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 397 | 662 | 5.9E-45 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 151 | 171 | 0.11 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 262 | 8.62E-46 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 378 | 665 | 1.62E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 362 | 469 | 5.1E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 470 | 671 | 2.0E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 95 | 276 | 5.6E-49 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 94 | 8.9E-12 | IPR032675 |
| SMART | SM00220 | serkin_6 | 394 | 665 | 1.9E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 394 | 673 | 39.792168 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 514 | 526 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 400 | 422 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 196 | 209 | 3.3E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 151 | 164 | 3.3E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_025804266.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Panicum hallii] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3GVI4 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_2G007700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology