HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Chr19G018570
Species & Taxonomic ID: Sporobolus alterniflorus & 29706
Genome Assembly: GWHCBIM00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
GWHCBIM00000019 43438723 43439889 - Chr19G018570
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
0.00 0.00 Da 0.00 0.00 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 14 53 1.0E-5 IPR001810
SUPERFAMILY SSF81383 F-box domain 14 68 3.53E-11 IPR036047
Gene3D G3DSA:1.20.1280.50 - 11 48 4.1E-5 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_004958880.1 uncharacterized protein LOC101756160 [Setaria italica] 0
TrEMBL A0A5J9UTB1 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_29080 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Eleusine coracana subsp. coracana 3 gene-QOZ80_7AG0553520, gene-QOZ80_7AG0553530 ...
gene-QOZ80_7BG0584610
Poaceae Sporobolus alterniflorus 1 Chr19G018570
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.