Basic Information
Locus ID:
Chr19G017100
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000019 | 40646156 | 40648888 | + | Chr19G017100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13983 | STKc_WNK | 29 | 286 | 2.57297E-148 | - |
| Pfam | PF00069 | Protein kinase domain | 34 | 286 | 6.0E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 33 | 287 | 1.09E-63 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 114 | 293 | 3.0E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 18 | 112 | 7.9E-28 | - |
| SMART | SM00220 | serkin_6 | 31 | 286 | 7.7E-58 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 31 | 286 | 37.983017 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 153 | 165 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 447 | 481 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22420.1 | with no lysine (K) kinase 2. Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. | 0 |
| RefSeq | XP_025802346.1 | probable serine/threonine-protein kinase WNK3 isoform X2 [Panicum hallii] | 0 |
| Q0D847 | Probable serine/threonine-protein kinase WNK3 OS=Oryza sativa subsp. japonica OX=39947 GN=WNK3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9W1Z1 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_15497 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Chr19G017100.