Basic Information
Locus ID:
Chr19G015510
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
G-quadruplex DNA unwinding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000019 | 34419354 | 34421433 | + | Chr19G015510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04481 | RPA1_DBD_B_like | 108 | 195 | 3.60862E-16 | - |
| CDD | cd04480 | RPA1_DBD_A_like | 1 | 65 | 1.44802E-14 | - |
| SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | 2 | 67 | 7.42E-8 | IPR012340 |
| SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | 101 | 193 | 5.65E-12 | IPR012340 |
| SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | 212 | 280 | 3.08E-10 | IPR012340 |
| Gene3D | G3DSA:2.40.50.140 | - | 200 | 286 | 6.0E-12 | - |
| Gene3D | G3DSA:2.40.50.140 | - | 75 | 196 | 7.7E-17 | - |
| Gene3D | G3DSA:2.40.50.140 | - | 1 | 68 | 6.0E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 375 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039821022.1 | replication protein A 70 kDa DNA-binding subunit C-like [Panicum virgatum] | 0 |
| TrEMBL | A0A5J9VTJ4 | Rep_fac-A_C domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_12585 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology