Basic Information
Locus ID:
Chr19G015010
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000019 | 29931592 | 29938762 | - | Chr19G015010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 168 | 263 | 1.98536E-46 | - |
| Pfam | PF00564 | PB1 domain | 181 | 265 | 3.6E-19 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 180 | 266 | 6.28E-23 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 183 | 266 | 9.4E-15 | - |
| SMART | SM00666 | PB1_new | 179 | 266 | 1.8E-31 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 534 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 520 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.3 | - | 0 |
| RefSeq | XP_021304085.1 | uncharacterized protein LOC8075992 isoform X2 [Sorghum bicolor] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VUC4 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_12921 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology