Basic Information
Locus ID:
Chr19G010660
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
thaumatin-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000019 | 13906674 | 13907182 | - | Chr19G010660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00314 | Thaumatin family | 32 | 122 | 2.2E-26 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 23 | 156 | 1.96E-44 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 23 | 122 | 1.2E-31 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 123 | 156 | 8.0E-6 | IPR037176 |
| SMART | SM00205 | tha2 | 26 | 156 | 1.4E-17 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 121 | 156 | 0.0058 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 36 | 125 | 1.1E-28 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 39 | 0.027 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 33 | 156 | 27.072943 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_020160634.1 | thaumatin-like protein [Aegilops tauschii subsp. strangulata] | 0 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453DMK7 | Thaumatin-like protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology