Basic Information
Locus ID:
Chr19G010220
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
WRKY4
Description:
DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000019 | 12608320 | 12613445 | - | Chr19G010220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 223 | 279 | 4.1E-24 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 380 | 437 | 1.6E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 371 | 439 | 2.48E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 221 | 281 | 1.83E-25 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 207 | 282 | 7.9E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 364 | 440 | 2.1E-35 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 379 | 438 | 7.0E-40 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 222 | 280 | 1.6E-34 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 223 | 281 | 23.376081 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 374 | 439 | 37.412945 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 420 | 454 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 454 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 363 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_004962924.1 | probable WRKY transcription factor 3 [Setaria italica] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9WPJ8 | EcWRKY-19 OS=Eragrostis curvula OX=38414 GN=EJB05_01428 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology