Basic Information
Locus ID:
Chr19G008270
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000019 | 9607083 | 9612220 | - | Chr19G008270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 781 | 1038 | 8.76799E-112 | - |
| CDD | cd06410 | PB1_UP2 | 44 | 139 | 3.29213E-42 | - |
| Pfam | PF00564 | PB1 domain | 60 | 140 | 4.8E-15 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 777 | 1037 | 1.1E-62 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 56 | 141 | 1.08E-18 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 763 | 1036 | 2.87E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 768 | 862 | 1.7E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 863 | 1046 | 6.6E-53 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 61 | 142 | 5.2E-12 | - |
| SMART | SM00666 | PB1_new | 55 | 142 | 2.0E-24 | IPR000270 |
| SMART | SM00220 | serkin_6 | 775 | 1044 | 7.6E-57 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 775 | 1045 | 41.841599 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 900 | 912 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 781 | 806 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 857 | 870 | 1.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 894 | 912 | 1.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1009 | 1031 | 1.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 965 | 987 | 1.2E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 734 | 749 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 312 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 727 | 750 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 593 | 618 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 303 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24715.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_002442438.2 | uncharacterized protein LOC8069730 isoform X1 [Sorghum bicolor] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SJC9 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_55575 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology