Basic Information
Locus ID:
Chr19G007630
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Wall-associated receptor kinase 5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000019 | 8787456 | 8790441 | - | Chr19G007630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 309 | 347 | 1.81047E-5 | - |
| Pfam | PF00069 | Protein kinase domain | 436 | 703 | 2.7E-44 | IPR000719 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 36 | 100 | 8.6E-10 | IPR025287 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 420 | 708 | 2.05E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 410 | 511 | 3.0E-28 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 312 | 359 | 1.6E-8 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 265 | 311 | 5.1E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 512 | 728 | 7.3E-50 | - |
| SMART | SM00181 | egf_5 | 259 | 308 | 57.0 | IPR000742 |
| SMART | SM00220 | serkin_6 | 436 | 709 | 1.3E-36 | IPR000719 |
| SMART | SM00179 | egfca_6 | 309 | 358 | 1.2E-9 | IPR001881 |
| SMART | SM00181 | egf_5 | 312 | 358 | 0.5 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 436 | 709 | 35.269291 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 442 | 465 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 557 | 569 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 309 | 342 | - | IPR018097 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 739 | 756 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 731 | 756 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_004964206.3 | wall-associated receptor kinase 1 [Setaria italica] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | K3Z436 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology