Basic Information
Locus ID:
Chr19G004250
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000019 | 4042172 | 4053708 | + | Chr19G004250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 351 | 567 | 5.1E-19 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 325 | 567 | 2.34E-41 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 66 | 233 | 3.29E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 8 | 177 | 1.0E-18 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 391 | 579 | 1.1E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 178 | 243 | 4.0E-5 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 317 | 388 | 1.9E-10 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 295 | 572 | 19.01519 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 288 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_020395953.1 | uncharacterized protein LOC100273714 isoform X1 [Zea mays] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6DZE8 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Zea mays OX=4577 GN=SRF3_3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology