Basic Information
Locus ID:
Chr19G000700
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the monovalent cation proton antiporter 1 (CPA1) transporter (TC 2.A.36) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000019 | 656050 | 660934 | - | Chr19G000700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 22 | 436 | 3.2E-59 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 140 | 191 | 1.1E-14 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 18 | 439 | 1.1E-77 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 147 | 157 | 2.0E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 92 | 106 | 2.0E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 107 | 115 | 2.0E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 78 | 89 | 2.0E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_004958612.1 | sodium/hydrogen exchanger 2 [Setaria italica] | 0 |
| Q9SXJ8 | Sodium/hydrogen exchanger 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHX1 PE=2 SV=1 | 0 | |
| TrEMBL | D2KBP7 | Sodium/hydrogen exchanger OS=Aeluropus lagopoides OX=293749 GN=NHX PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology