Basic Information
Locus ID:
Chr18G014300
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000018 | 42959148 | 42962395 | - | Chr18G014300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 156 | 214 | 1.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 229 | 288 | 7.6E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 711 | 998 | 1.3E-40 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 302 | 324 | 0.34 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 76 | 1.9E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 703 | 999 | 3.51E-70 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 301 | 608 | 1.96E-54 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 366 | 7.99E-64 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 295 | 3.6E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 296 | 372 | 1.3E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 373 | 629 | 2.7E-63 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 792 | 1020 | 8.2E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 691 | 791 | 7.3E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 192 | 1.2E-36 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 514 | 538 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 104 | 128 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 251 | 275 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 348 | 372 | 64.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 707 | 999 | 2.6E-26 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 178 | 202 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 562 | 586 | 19.0 | IPR003591 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 24 | 5.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 707 | 1009 | 35.410629 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 850 | 862 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 713 | 741 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_039800183.1 | receptor-like protein kinase HSL1 [Panicum virgatum] | 0 |
| O49545 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0UC88 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3NG258139 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology