Basic Information
Locus ID:
Chr18G013400
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
cysteine-type peptidase activity
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000018 | 42228119 | 42237553 | + | Chr18G013400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 942 | 1072 | 1.08828E-43 | IPR033734 |
| CDD | cd09612 | Jacalin | 517 | 647 | 3.00884E-47 | IPR033734 |
| CDD | cd09612 | Jacalin | 753 | 883 | 4.56974E-43 | IPR033734 |
| CDD | cd02248 | Peptidase_C1A | 130 | 343 | 5.43953E-99 | IPR039417 |
| Pfam | PF01419 | Jacalin-like lectin domain | 753 | 883 | 3.8E-27 | IPR001229 |
| Pfam | PF00112 | Papain family cysteine protease | 129 | 343 | 1.3E-78 | IPR000668 |
| Pfam | PF01419 | Jacalin-like lectin domain | 517 | 647 | 4.1E-29 | IPR001229 |
| Pfam | PF00396 | Granulin | 372 | 419 | 1.1E-9 | IPR000118 |
| Pfam | PF01419 | Jacalin-like lectin domain | 942 | 1072 | 1.6E-27 | IPR001229 |
| Pfam | PF08246 | Cathepsin propeptide inhibitor domain (I29) | 37 | 97 | 6.3E-14 | IPR013201 |
| SUPERFAMILY | SSF57277 | Granulin repeat | 358 | 392 | 4.32E-7 | - |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 742 | 882 | 3.79E-39 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 506 | 646 | 3.01E-42 | IPR036404 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 33 | 344 | 8.47E-104 | IPR038765 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 928 | 1072 | 3.27E-39 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 496 | 647 | 2.1E-55 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 925 | 1072 | 9.6E-49 | IPR036404 |
| Gene3D | G3DSA:2.10.25.160 | Granulin | 359 | 427 | 5.3E-11 | IPR037277 |
| Gene3D | G3DSA:2.100.10.30 | - | 733 | 883 | 1.3E-47 | IPR036404 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 21 | 346 | 9.9E-112 | - |
| SMART | SM00915 | Jacalin_2 | 942 | 1073 | 1.1E-38 | IPR001229 |
| SMART | SM00645 | pept_c1 | 129 | 344 | 2.7E-119 | IPR000668 |
| SMART | SM00915 | Jacalin_2 | 753 | 884 | 1.1E-33 | IPR001229 |
| SMART | SM00848 | Inhibitor_I29_2 | 37 | 97 | 3.7E-22 | IPR013201 |
| SMART | SM00277 | GRAN_2 | 361 | 418 | 2.4E-19 | IPR000118 |
| SMART | SM00915 | Jacalin_2 | 517 | 648 | 6.6E-36 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 931 | 1073 | 48.066341 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 506 | 648 | 49.332531 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 742 | 884 | 45.562092 | IPR001229 |
| ProSitePatterns | PS00639 | Eukaryotic thiol (cysteine) proteases histidine active site. | 287 | 297 | - | IPR025660 |
| ProSitePatterns | PS00640 | Eukaryotic thiol (cysteine) proteases asparagine active site. | 304 | 323 | - | IPR025661 |
| ProSitePatterns | PS00139 | Eukaryotic thiol (cysteine) proteases cysteine active site. | 147 | 158 | - | IPR000169 |
| PRINTS | PR00705 | Papain cysteine protease (C1) family signature | 304 | 310 | 2.0E-9 | IPR000668 |
| PRINTS | PR00705 | Papain cysteine protease (C1) family signature | 289 | 299 | 2.0E-9 | IPR000668 |
| PRINTS | PR00705 | Papain cysteine protease (C1) family signature | 147 | 162 | 2.0E-9 | IPR000668 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 495 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.3 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_025805904.1 | LOW QUALITY PROTEIN: jacalin-related lectin 3-like [Panicum hallii] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0DTN5 | Pept_C1 domain-containing protein OS=Oryza meridionalis OX=40149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology