Basic Information
Locus ID:
Chr18G012460
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000018 | 40974748 | 40980188 | - | Chr18G012460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 645 | 909 | 2.51905E-94 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 72 | 3.3E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 641 | 907 | 1.0E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 627 | 913 | 1.35E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 396 | 1.43E-47 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 715 | 924 | 3.7E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 195 | 399 | 5.2E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 194 | 2.5E-40 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 613 | 714 | 5.8E-34 | - |
| SMART | SM00220 | serkin_6 | 639 | 912 | 2.1E-33 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 273 | 295 | 7.419328 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 639 | 912 | 38.915863 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 758 | 770 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 645 | 667 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_039837810.1 | leucine-rich repeat receptor protein kinase HPCA1-like [Panicum virgatum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9U8X8 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_36127 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology