Basic Information
Locus ID:
Chr18G012310
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000018 | 40791113 | 40801848 | + | Chr18G012310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 621 | 887 | 3.01611E-85 | - |
| Pfam | PF13855 | Leucine rich repeat | 150 | 209 | 2.3E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 617 | 882 | 4.9E-47 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 68 | 2.2E-9 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 600 | 900 | 1.22E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 403 | 3.51E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 691 | 906 | 1.8E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 586 | 690 | 6.6E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 288 | 417 | 1.2E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 287 | 8.9E-61 | IPR032675 |
| SMART | SM00220 | serkin_6 | 615 | 887 | 3.9E-44 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 615 | 888 | 38.845192 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 735 | 747 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 621 | 643 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 925 | 945 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025809295.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Panicum hallii] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0A9GJ58 | Protein kinase domain-containing protein OS=Arundo donax OX=35708 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology