Basic Information
Locus ID:
Chr18G011970
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000018 | 40158725 | 40174270 | + | Chr18G011970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 654 | 689 | 8.8E-7 | IPR001680 |
| Pfam | PF00069 | Protein kinase domain | 41 | 295 | 8.1E-50 | IPR000719 |
| SUPERFAMILY | SSF49354 | PapD-like | 307 | 440 | 2.62E-10 | IPR008962 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 469 | 735 | 3.24E-31 | IPR036322 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 27 | 305 | 1.62E-67 | IPR011009 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 318 | 445 | 1.3E-13 | IPR013783 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 19 | 107 | 1.5E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 129 | 317 | 1.0E-48 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 476 | 737 | 5.5E-51 | IPR015943 |
| SMART | SM00220 | serkin_6 | 39 | 305 | 1.3E-36 | IPR000719 |
| SMART | SM00320 | WD40_4 | 692 | 732 | 0.18 | IPR001680 |
| SMART | SM00320 | WD40_4 | 648 | 689 | 9.4E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 465 | 505 | 69.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 707 | 737 | 10.541869 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 700 | 737 | 9.572873 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 39 | 305 | 37.71447 | IPR000719 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 655 | 691 | 10.864685 | - |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 322 | 442 | 8.898499 | IPR000535 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 655 | 698 | 13.549507 | IPR001680 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 45 | 67 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 169 | 181 | - | IPR008271 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 676 | 690 | - | IPR019775 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23220.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 14. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_048541715.1 | uncharacterized protein LOC125520751 isoform X3 [Triticum urartu] | 0 |
| Q8H199 | Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana OX=3702 GN=CRK14 PE=2 SV=2 | 0 | |
| TrEMBL | A0A811QD78 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS37637 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology