Basic Information
Locus ID:
Chr18G010500
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000018 | 37768028 | 37768906 | + | Chr18G010500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 173 | 4.76E-17 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 83 | 202 | 2.1E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 82 | 1.8E-12 | - |
| SMART | SM00220 | serkin_6 | 1 | 175 | 7.6E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 206 | 9.912894 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002440312.1 | putative cyclin-dependent kinase F-2 [Sorghum bicolor] | 0 |
| TrEMBL | A0A5J9TBA1 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_42057 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4BG0329520, gene-QOZ80_6BG0502780 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr02G032360, Chr05G001370, Chr18G010500 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-40642, nbis-gene-55776, nbis-gene-59079 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g31049, Zma_g33307 |