Basic Information
Locus ID:
Chr18G009170
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000018 | 34851574 | 34853007 | - | Chr18G009170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 63 | 140 | 2.1E-16 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 61 | 157 | 2.82E-19 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 47 | 160 | 5.6E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 162 | 14.958733 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_039783638.1 | CDPK-related kinase 3-like isoform X2 [Panicum virgatum] | 0 |
| Q10KY3 | Calcium/calmodulin-dependent serine/threonine-protein kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CAMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6SCN7 | CDPK-related kinase 3-like OS=Panicum miliaceum OX=4540 GN=C2845_PM02G09710 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg58837 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00012123 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000004710, gene:ENSEOMG00000007423 ... |
| Apiaceae | Apium graveolens | 1 | Ag1G00766 |
| Brassicaceae | Brassica nigra | 1 | BniS02554g190.2N |
| Plantaginaceae | Plantago ovata | 1 | Pov_00036522 |
| Poaceae | Echinochloa crus-galli | 2 | BH07.84, Contig80_1.3 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_006613 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0600906 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr18G009170, Chr18G009200 |
| Poaceae | Zea mays | 1 | Zm00001eb351760_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-47862 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc07g08160 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_6_RagTag.1077 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-18439 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-5700 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-798 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132606690 |
| Zosteraceae | Zostera marina | 2 | Zosma03g11280.v3.1, Zosma06g15170.v3.1 |