Basic Information
Locus ID:
Chr18G004740
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000018 | 10445019 | 10445699 | + | Chr18G004740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 93 | 220 | 2.2E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 75 | 220 | 1.4E-38 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 165 | 221 | 1.1E-14 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 68 | 163 | 1.8E-30 | - |
| SMART | SM00219 | tyrkin_6 | 90 | 226 | 1.7E-4 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 90 | 226 | 19.453344 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 96 | 118 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_039836152.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Panicum virgatum] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9SES9 | non-specific serine/threonine protein kinase (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_57381 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.1303.V1.1 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_UnG0729540 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_037781, gene-QYE76_062350 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr18G004740 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G771600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7BG056900, gene_TRIDC7BG056990 |