Basic Information
Locus ID:
Chr18G004370
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000018 | 8324056 | 8332884 | - | Chr18G004370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 196 | 462 | 2.88257E-102 | - |
| Pfam | PF00069 | Protein kinase domain | 191 | 459 | 2.7E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 172 | 468 | 6.88E-85 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 266 | 481 | 5.1E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 171 | 265 | 2.0E-33 | - |
| SMART | SM00220 | serkin_6 | 190 | 461 | 4.1E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 190 | 467 | 39.184406 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 196 | 219 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 312 | 324 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 526 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56720.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_034586931.1 | probable receptor-like protein kinase At5g18500 [Setaria viridis] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | A0A811S0J3 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS58404 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology