Basic Information
Locus ID:
Chr18G002690
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000018 | 3552423 | 3567419 | + | Chr18G002690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | von Willebrand factor type A domain | 50 | 227 | 9.0E-21 | IPR002035 |
| SUPERFAMILY | SSF53300 | vWA-like | 45 | 230 | 4.6E-25 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 50 | 231 | 5.2E-37 | IPR036465 |
| SMART | SM00327 | VWA_4 | 48 | 234 | 2.9E-18 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 50 | 229 | 18.582632 | IPR002035 |
| Coils | Coil | Coil | 371 | 391 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60710.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_004978827.1 | uncharacterized protein LOC101773048 [Setaria italica] | 0 |
| TrEMBL | A0A5J9U491 | VWFA domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_34366 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology