Basic Information
Locus ID:
Chr18G001970
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
serine threonine-protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000018 | 2273261 | 2276251 | - | Chr18G001970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 476 | 705 | 7.5E-39 | IPR000719 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 53 | 289 | 1.31E-14 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 452 | 773 | 1.35E-65 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 436 | 553 | 6.6E-33 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 46 | 212 | 5.7E-6 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 554 | 781 | 1.8E-45 | - |
| SMART | SM00220 | serkin_6 | 473 | 778 | 1.3E-19 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 473 | 777 | 34.251644 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 607 | 619 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 479 | 501 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 416 | 430 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 416 | 435 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_034588709.1 | putative serine/threonine-protein kinase-like protein CCR3 [Setaria viridis] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4U6VJH9 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_3G049100v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology