Basic Information
Locus ID:
Chr18G000920
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000018 | 992038 | 996758 | + | Chr18G000920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 726 | 974 | 7.46952E-130 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1119 | 1383 | 7.9E-125 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 757 | 893 | 5.7E-24 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 754 | 902 | 2.31E-20 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 726 | 976 | 2.8E-59 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 636 | 1388 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 754 | 983 | 30.714567 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 191 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 461 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 580 | 596 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 639 | 660 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 278 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 506 | 527 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 99 | 113 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 485 | 505 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 561 | 579 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 485 | 596 | - | - |
| Coils | Coil | Coil | 1077 | 1097 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_002440611.1 | translocase of chloroplast 159, chloroplastic [Sorghum bicolor] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1Z5R1K8 | AIG1-type G domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3009G046800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology