Basic Information
Locus ID:
Chr17G017470
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000017 | 45679107 | 45681491 | + | Chr17G017470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 495 | 764 | 6.2812E-94 | - |
| CDD | cd01098 | PAN_AP_plant | 338 | 423 | 1.77057E-18 | - |
| Pfam | PF01453 | D-mannose binding lectin | 95 | 193 | 8.9E-13 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 492 | 759 | 4.8E-45 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 348 | 407 | 6.8E-10 | IPR003609 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 473 | 763 | 3.37E-75 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 115 | 189 | 2.22E-9 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 565 | 771 | 2.0E-56 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 39 | 168 | 4.1E-7 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 461 | 564 | 3.8E-28 | - |
| SMART | SM00220 | serkin_6 | 489 | 762 | 6.9E-35 | IPR000719 |
| SMART | SM00108 | blect_4 | 49 | 170 | 3.5E-4 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 17 | 793 | 1.0E-201 | IPR024171 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 489 | 763 | 36.131462 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 43 | 166 | 9.410036 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 341 | 424 | 7.93332 | IPR003609 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 613 | 625 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 495 | 517 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_004967471.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Setaria italica] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9UGP9 | non-specific serine/threonine protein kinase (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_32660 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology