Basic Information
Locus ID:
Chr17G016930
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000017 | 45123377 | 45124354 | - | Chr17G016930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 26 | 134 | 8.53568E-14 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 156 | 260 | 1.1E-14 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 146 | 260 | 7.85E-22 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 25 | 137 | 5.56E-18 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 142 | 256 | 4.0E-25 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 261 | 325 | 1.8E-13 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 5 | 141 | 4.5E-19 | IPR008974 |
| SMART | SM00225 | BTB_4 | 165 | 262 | 8.4E-12 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 1 | 133 | 12.413258 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 165 | 225 | 10.219954 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_014660866.1 | BTB/POZ and MATH domain-containing protein 1 [Setaria italica] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T1D9 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48231 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology