Basic Information
Locus ID:
Chr17G016920
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000017 | 45115653 | 45116639 | - | Chr17G016920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 11 | 132 | 2.23823E-21 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 153 | 261 | 2.6E-22 | IPR000210 |
| Pfam | PF00917 | MATH domain | 30 | 130 | 4.2E-9 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 16 | 137 | 1.96E-23 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 139 | 263 | 8.24E-30 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 11 | 137 | 8.1E-22 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 264 | 328 | 6.0E-14 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 138 | 259 | 3.9E-34 | IPR011333 |
| SMART | SM00225 | BTB_4 | 161 | 265 | 1.5E-21 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 161 | 228 | 16.321144 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 7 | 132 | 18.166395 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_012702339.1 | BTB/POZ and MATH domain-containing protein 1 [Setaria italica] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T136 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48139 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology