Basic Information
Locus ID:
Chr17G016650
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000017 | 44910429 | 44912774 | + | Chr17G016650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 79 | 4.5E-13 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 396 | 595 | 8.6E-23 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 397 | 671 | 3.46E-40 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 228 | 9.87E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 153 | 246 | 1.8E-18 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 469 | 692 | 1.8E-29 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 366 | 468 | 1.4E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 152 | 1.6E-19 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 393 | 671 | 22.506287 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 282 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 285 | - | - |
| Coils | Coil | Coil | 654 | 681 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025821916.1 | probable LRR receptor-like serine/threonine-protein kinase At4g31250 [Panicum hallii] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T195 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48288 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology