Basic Information
Locus ID:
Chr17G016050
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000017 | 44132635 | 44133327 | - | Chr17G016050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 16 | 208 | 2.3E-23 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 206 | 2.49E-48 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 83 | 9.3E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 84 | 224 | 6.3E-29 | - |
| SMART | SM00220 | serkin_6 | 15 | 219 | 2.8E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 15 | 230 | 23.792482 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 21 | 43 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21240.1 | wall associated kinase 3. encodes a wall-associated kinase | 0 |
| RefSeq | XP_034598623.1 | wall-associated receptor kinase 3-like [Setaria viridis] | 0 |
| Q9LMN8 | Wall-associated receptor kinase 3 OS=Arabidopsis thaliana OX=3702 GN=WAK3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9T245 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48415 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_050526 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr17G016050 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G642000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG054080, gene_TRIDC6BG062950 |
| Poaceae | Triticum aestivum | 1 | TraesCS6A02G361200.1.cds1 |