Basic Information
Locus ID:
Chr17G015670
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Hsp90 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000017 | 43480649 | 43484970 | - | Chr17G015670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 87 | 283 | 1.54238E-95 | - |
| Pfam | PF00183 | Hsp90 protein | 265 | 654 | 1.5E-160 | IPR001404 |
| Pfam | PF00183 | Hsp90 protein | 652 | 730 | 4.1E-16 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 101 | 260 | 4.3E-12 | IPR003594 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 611 | 712 | 3.01E-28 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 334 | 592 | 2.65E-90 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 77 | 293 | 1.09E-59 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 601 | 652 | 4.6E-18 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 64 | 308 | 1.1E-86 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 510 | 600 | 8.8E-34 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 332 | 509 | 5.4E-74 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 653 | 719 | 2.2E-17 | IPR037196 |
| SMART | SM00387 | HKATPase_4 | 100 | 262 | 2.0E-6 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 52 | 752 | 8.5E-226 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 98 | 107 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 78 | 98 | 6.1E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 99 | 121 | 6.1E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 148 | 165 | 6.1E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 250 | 267 | 6.1E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 269 | 287 | 6.1E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 166 | 183 | 6.1E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 195 | 217 | 6.1E-62 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 75 | 713 | 25.503735 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 719 | 763 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 721 | 735 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 317 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | NP_001305306.1 | Heat shock protein 90-5, chloroplastic [Zea mays] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D6QK75 | Heat shock protein 90-5 chloroplastic OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d052809 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology