Basic Information
Locus ID:
Chr17G011860
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000017 | 30614340 | 30618370 | - | Chr17G011860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 329 | 623 | 2.24461E-122 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 298 | 609 | 1.6E-91 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 329 | 635 | 1.32E-70 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 332 | 628 | 1.1E-45 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 119 | 150 | - | - |
| Coils | Coil | Coil | 208 | 228 | - | - |
| Coils | Coil | Coil | 260 | 280 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_039816325.1 | probable galacturonosyltransferase 4 isoform X1 [Panicum virgatum] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9T5G7 | Hexosyltransferase OS=Eragrostis curvula OX=38414 GN=EJB05_49844 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology